BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D03LP1|AL428710
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1695 0.0
>3x_Contig1555
Length = 10828
Score = 1695 bits (855), Expect = 0.0
Identities = 869/871 (99%), Gaps = 2/871 (0%)
Strand = Plus / Minus
Query: 1 gatccttattttagtgtatataaattggattcaaaccagttttatgatttcgatcctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9450 gatccttattttagtgtatataaattggattcaaaccagttttatgatttcgatcctctt 9391
Query: 61 cagcactttatgacttattattggattcgagcattagtttcaaattaaaggcataatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9390 cagcactttatgacttattattggattcgagcattagtttcaaattaaaggcataatcaa 9331
Query: 121 gtagaaagaagactattcaattcatttcccttccgaagcttcgcatatcccgattaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9330 gtagaaagaagactattcaattcatttcccttccgaagcttcgcatatcccgattaaata 9271
Query: 181 attaataaatggctggtattaaacacagaagagactcagctgagtctatcaataccgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270 attaataaatggctggtattaaacacagaagagactcagctgagtctatcaataccgaca 9211
Query: 241 tcatcacgttgtcccgttttatcttggaccaacagcatctttctgcgaaaaatgccactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9210 tcatcacgttgtcccgttttatcttggaccaacagcatctttctgcgaaaaatgccactg 9151
Query: 301 gggagttttctatgcttttgaactctttgcagtttgcatttaaatttatttctcaaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9150 gggagttttctatgcttttgaactctttgcagtttgcatttaaatttatttctcaaacaa 9091
Query: 361 ttagacgtgctgaattggttaacttgatcggattggctggtgcttcaaatagtaccggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9090 ttagacgtgctgaattggttaacttgatcggattggctggtgcttcaaatagtaccggtg 9031
Query: 421 accagcaaaagaagttggatgtgttgggtgatgaaatcttcatcaatgctatgaaagcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9030 accagcaaaagaagttggatgtgttgggtgatgaaatcttcatcaatgctatgaaagcgt 8971
Query: 481 ctggtaacgtcaaggtacttgtgtctgaagaacaagaagatttgatcgttttccgtaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8970 ctggtaacgtcaaggtacttgtgtctgaagaacaagaagatttgatcgttttccgtaaca 8911
Query: 541 gccctggtaaatacgcggtatgttgtgacccaattgatggttcgtctaacttggatgctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8910 gccctggtaaatacgcggtatgttgtgacccaattgatggttcgtctaacttggatgctg 8851
Query: 601 gtgtctcagtgggta-cattgtctctctgttcaagattcatgagaatcagaatggtaact 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8850 gtgtctcagtgggtaccattgtctctctgttcaagattcatgagaatcagaatggtaact 8791
Query: 660 ctggggaagaagatagtgagggtaccatcaacgatgttgctcgttgcggtagagaaatgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8790 ctggggaagaagatagtgagggtaccatcaacgatgttgctcgttgcggtagagaaatgg 8731
Query: 720 ttgctgcttgttacactatgtacggtgcgtccacgcattttggttttaactaccggtgca 779
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 8730 ttgctgcttgttacactatgtacggtgcgtccacgca-tttggttttaactaccggtgca 8672
Query: 780 ggtgtcaatgggttcactttggacaataacttgggtgaatttatcttgacttacccagaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8671 ggtgtcaatgggttcactttggacaataacttgggtgaatttatcttgacttacccagaa 8612
Query: 840 ttgagactacctgagcaaaaatctatttact 870
|||||||||||||||||||||||||||||||
Sbjct: 8611 ttgagactacctgagcaaaaatctatttact 8581
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6942
Number of Sequences: 1807
Number of extensions: 6942
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)